Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Csk | Egfr | MGP_SPRETEiJ_P0091658 | MGP_SPRETEiJ_P0027080 | C-src tyrosine kinase. | Epidermal growth factor receptor. | 0.839 |
Csk | Fyn | MGP_SPRETEiJ_P0091658 | MGP_SPRETEiJ_P0023801 | C-src tyrosine kinase. | Fyn proto-oncogene. | 0.816 |
Csk | Grap2 | MGP_SPRETEiJ_P0091658 | MGP_SPRETEiJ_P0040851 | C-src tyrosine kinase. | GRB2-related adaptor protein 2. | 0.547 |
Csk | Inppl1 | MGP_SPRETEiJ_P0091658 | MGP_SPRETEiJ_P0084387 | C-src tyrosine kinase. | Inositol polyphosphate phosphatase-like 1. | 0.647 |
Csk | Plcg2 | MGP_SPRETEiJ_P0091658 | MGP_SPRETEiJ_P0089674 | C-src tyrosine kinase. | Phospholipase C, gamma 2. | 0.485 |
Csk | Ptk2 | MGP_SPRETEiJ_P0091658 | MGP_SPRETEiJ_P0040208 | C-src tyrosine kinase. | PTK2 protein tyrosine kinase 2. | 0.703 |
Csk | Ptpn11 | MGP_SPRETEiJ_P0091658 | MGP_SPRETEiJ_P0073085 | C-src tyrosine kinase. | Protein tyrosine phosphatase, non-receptor type 11. | 0.825 |
Csk | Shc1 | MGP_SPRETEiJ_P0091658 | MGP_SPRETEiJ_P0061035 | C-src tyrosine kinase. | Src homology 2 domain-containing transforming protein C1. | 0.820 |
Csk | Src | MGP_SPRETEiJ_P0091658 | MGP_SPRETEiJ_P0057937 | C-src tyrosine kinase. | Rous sarcoma oncogene. | 0.989 |
Csk | Yes1 | MGP_SPRETEiJ_P0091658 | MGP_SPRETEiJ_P0070110 | C-src tyrosine kinase. | YES proto-oncogene 1, Src family tyrosine kinase. | 0.900 |
Egfr | Csk | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0091658 | Epidermal growth factor receptor. | C-src tyrosine kinase. | 0.839 |
Egfr | Fyn | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0023801 | Epidermal growth factor receptor. | Fyn proto-oncogene. | 0.776 |
Egfr | Grap2 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0040851 | Epidermal growth factor receptor. | GRB2-related adaptor protein 2. | 0.848 |
Egfr | Inppl1 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0084387 | Epidermal growth factor receptor. | Inositol polyphosphate phosphatase-like 1. | 0.521 |
Egfr | Plcg2 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0089674 | Epidermal growth factor receptor. | Phospholipase C, gamma 2. | 0.982 |
Egfr | Ptk2 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0040208 | Epidermal growth factor receptor. | PTK2 protein tyrosine kinase 2. | 0.998 |
Egfr | Ptpn11 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0073085 | Epidermal growth factor receptor. | Protein tyrosine phosphatase, non-receptor type 11. | 0.999 |
Egfr | Shc1 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0061035 | Epidermal growth factor receptor. | Src homology 2 domain-containing transforming protein C1. | 0.999 |
Egfr | Src | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0057937 | Epidermal growth factor receptor. | Rous sarcoma oncogene. | 0.997 |
Egfr | Yes1 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0070110 | Epidermal growth factor receptor. | YES proto-oncogene 1, Src family tyrosine kinase. | 0.925 |
page 1 of 6