STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem165Transmembrane protein 165. (323 aa)    
Predicted Functional Partners:
Tm9sf2
Transmembrane 9 superfamily member 2.
      
 0.613
C1galt1c1
C1GALT1-specific chaperone 1.
   
  
 0.528
MGP_SPRETEiJ_P0094646
annotation not available
      
 0.519
Atp2a3
ATPase, Ca++ transporting, ubiquitous.
    
 
 0.517
Atp2a2
ATPase, Ca++ transporting, cardiac muscle, slow twitch 2.
    
 
 0.517
Atp2a1
ATPase, Ca++ transporting, cardiac muscle, fast twitch 1.
    
 
 0.517
Atp2c2
ATPase, Ca++ transporting, type 2C, member 2.
    
 
 0.517
Atp2c1
ATPase, Ca++-sequestering.
    
 
 0.517
Tmem181a
Transmembrane protein 181A.
     
 0.477
Slc10a7
Solute carrier family 10 (sodium/bile acid cotransporter family), member 7.
      
 0.477
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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