STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zscan21Zinc finger and SCAN domain containing 21. (555 aa)    
Predicted Functional Partners:
MGP_SPRETEiJ_P0023847
annotation not available
    
  0.639
Zscan20
Zinc finger and SCAN domains 20.
  
 
  
0.631
Tvp23a
Trans-golgi network vesicle protein 23A.
      
 0.564
Zscan22
Zinc finger and SCAN domain containing 22.
    
 
0.554
MGP_SPRETEiJ_P0056183
annotation not available
   
  
0.514
Zfp397
Zinc finger protein 397.
  
 
 
0.455
Trim41
Tripartite motif-containing 41.
    
 0.425
Trim17
Tripartite motif-containing 17.
    
 0.416
Zfp446
Zinc finger protein 446.
    
  
0.410
L3mbtl2
L3MBTL2 polycomb repressive complex 1 subunit.
    
 0.400
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.