Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gabarap | Gabarapl1 | MGP_SPRETEiJ_P0029099 | MGP_SPRETEiJ_P0079590 | Gamma-aminobutyric acid receptor associated protein. | Gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1. | 0.980 |
Gabarap | Gm26938 | MGP_SPRETEiJ_P0029099 | MGP_SPRETEiJ_P0074645 | Gamma-aminobutyric acid receptor associated protein. | Predicted gene, 26938. | 0.627 |
Gabarap | MGP_SPRETEiJ_P0026675 | MGP_SPRETEiJ_P0029099 | MGP_SPRETEiJ_P0026675 | Gamma-aminobutyric acid receptor associated protein. | annotation not available | 0.743 |
Gabarap | MGP_SPRETEiJ_P0089607 | MGP_SPRETEiJ_P0029099 | MGP_SPRETEiJ_P0089607 | Gamma-aminobutyric acid receptor associated protein. | annotation not available | 0.926 |
Gabarap | Map1lc3a | MGP_SPRETEiJ_P0029099 | MGP_SPRETEiJ_P0057611 | Gamma-aminobutyric acid receptor associated protein. | Microtubule-associated protein 1 light chain 3 alpha. | 0.830 |
Gabarap | Map1lc3b | MGP_SPRETEiJ_P0029099 | MGP_SPRETEiJ_P0089821 | Gamma-aminobutyric acid receptor associated protein. | Microtubule-associated protein 1 light chain 3 beta. | 0.739 |
Gabarapl1 | Gabarap | MGP_SPRETEiJ_P0079590 | MGP_SPRETEiJ_P0029099 | Gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1. | Gamma-aminobutyric acid receptor associated protein. | 0.980 |
Gabarapl1 | Gm26938 | MGP_SPRETEiJ_P0079590 | MGP_SPRETEiJ_P0074645 | Gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1. | Predicted gene, 26938. | 0.627 |
Gabarapl1 | MGP_SPRETEiJ_P0026675 | MGP_SPRETEiJ_P0079590 | MGP_SPRETEiJ_P0026675 | Gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1. | annotation not available | 0.674 |
Gabarapl1 | MGP_SPRETEiJ_P0089607 | MGP_SPRETEiJ_P0079590 | MGP_SPRETEiJ_P0089607 | Gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1. | annotation not available | 0.926 |
Gabarapl1 | Map1lc3a | MGP_SPRETEiJ_P0079590 | MGP_SPRETEiJ_P0057611 | Gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1. | Microtubule-associated protein 1 light chain 3 alpha. | 0.829 |
Gabarapl1 | Map1lc3b | MGP_SPRETEiJ_P0079590 | MGP_SPRETEiJ_P0089821 | Gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1. | Microtubule-associated protein 1 light chain 3 beta. | 0.668 |
Gm26938 | Gabarap | MGP_SPRETEiJ_P0074645 | MGP_SPRETEiJ_P0029099 | Predicted gene, 26938. | Gamma-aminobutyric acid receptor associated protein. | 0.627 |
Gm26938 | Gabarapl1 | MGP_SPRETEiJ_P0074645 | MGP_SPRETEiJ_P0079590 | Predicted gene, 26938. | Gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1. | 0.627 |
Gm26938 | MGP_SPRETEiJ_P0026675 | MGP_SPRETEiJ_P0074645 | MGP_SPRETEiJ_P0026675 | Predicted gene, 26938. | annotation not available | 0.467 |
Gm26938 | MGP_SPRETEiJ_P0032358 | MGP_SPRETEiJ_P0074645 | MGP_SPRETEiJ_P0032358 | Predicted gene, 26938. | annotation not available | 0.471 |
Gm26938 | MGP_SPRETEiJ_P0089607 | MGP_SPRETEiJ_P0074645 | MGP_SPRETEiJ_P0089607 | Predicted gene, 26938. | annotation not available | 0.627 |
Gm26938 | Map1lc3a | MGP_SPRETEiJ_P0074645 | MGP_SPRETEiJ_P0057611 | Predicted gene, 26938. | Microtubule-associated protein 1 light chain 3 alpha. | 0.467 |
Gm26938 | Map1lc3b | MGP_SPRETEiJ_P0074645 | MGP_SPRETEiJ_P0089821 | Predicted gene, 26938. | Microtubule-associated protein 1 light chain 3 beta. | 0.467 |
Gm26938 | Tmem245 | MGP_SPRETEiJ_P0074645 | MGP_SPRETEiJ_P0064922 | Predicted gene, 26938. | Transmembrane protein 245. | 0.509 |
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