STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bhlha15Basic helix-loop-helix family, member a15. (197 aa)    
Predicted Functional Partners:
Arnt
Aryl hydrocarbon receptor nuclear translocator.
      
 0.697
Myod1
Myogenic differentiation 1.
    
 
 0.667
Clock
Circadian locomotor output cycles kaput.
      
 0.657
Notch1
Notch 1.
      
 0.519
Arntl
Aryl hydrocarbon receptor nuclear translocator-like.
      
 0.519
Sim2
Single-minded family bHLH transcription factor 2.
      
 0.516
Vhl
Von Hippel-Lindau tumor suppressor.
      
 0.516
Sim1
Single-minded family bHLH transcription factor 1.
      
 0.513
Cry1
Cryptochrome 1 (photolyase-like).
      
 0.512
Hes5
Hes family bHLH transcription factor 5.
      
 0.508
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.