STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tecpr1Tectonin beta-propeller repeat containing 1. (1166 aa)    
Predicted Functional Partners:
Atg5
Autophagy related 5.
    
 0.997
Wipi2
WD repeat domain, phosphoinositide interacting 2.
   
 
 0.931
Atg12
Autophagy related 12.
    
 
 0.923
Tubgcp5
Tubulin, gamma complex associated protein 5.
    
 0.837
Tubgcp6
Tubulin, gamma complex associated protein 6.
   
 0.816
Tubgcp3
Tubulin, gamma complex associated protein 3.
    
 0.800
Mccc2
methylcrotonoyl-Coenzyme A carboxylase 2 (beta).
   
 0.753
Pccb
Propionyl Coenzyme A carboxylase, beta polypeptide.
   
 0.753
Tubgcp4
Tubulin, gamma complex associated protein 4.
    
 0.748
Atg16l1
Autophagy related 16-like 1 (S. cerevisiae).
    
 
 0.671
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.