Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A630001G21Rik | Ddx58 | MGP_SPRETEiJ_P0019773 | MGP_SPRETEiJ_P0064209 | RIKEN cDNA A630001G21 gene. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58. | 0.724 |
A630001G21Rik | Ifi35 | MGP_SPRETEiJ_P0019773 | MGP_SPRETEiJ_P0031499 | RIKEN cDNA A630001G21 gene. | Interferon-induced protein 35. | 0.678 |
A630001G21Rik | Ifih1 | MGP_SPRETEiJ_P0019773 | MGP_SPRETEiJ_P0054047 | RIKEN cDNA A630001G21 gene. | Interferon induced with helicase C domain 1. | 0.471 |
A630001G21Rik | Parp9 | MGP_SPRETEiJ_P0019773 | MGP_SPRETEiJ_P0043321 | RIKEN cDNA A630001G21 gene. | Poly (ADP-ribose) polymerase family, member 9. | 0.705 |
A630001G21Rik | Samd9l | MGP_SPRETEiJ_P0019773 | MGP_SPRETEiJ_P0075260 | RIKEN cDNA A630001G21 gene. | Sterile alpha motif domain containing 9-like. | 0.686 |
Ddx58 | A630001G21Rik | MGP_SPRETEiJ_P0064209 | MGP_SPRETEiJ_P0019773 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58. | RIKEN cDNA A630001G21 gene. | 0.724 |
Ddx58 | Ifi35 | MGP_SPRETEiJ_P0064209 | MGP_SPRETEiJ_P0031499 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58. | Interferon-induced protein 35. | 0.749 |
Ddx58 | Ifi44 | MGP_SPRETEiJ_P0064209 | MGP_SPRETEiJ_P0063458 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58. | Interferon-induced protein 44. | 0.968 |
Ddx58 | Ifi44l | MGP_SPRETEiJ_P0064209 | MGP_SPRETEiJ_P0063462 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58. | Interferon-induced protein 44 like. | 0.748 |
Ddx58 | Ifih1 | MGP_SPRETEiJ_P0064209 | MGP_SPRETEiJ_P0054047 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58. | Interferon induced with helicase C domain 1. | 0.934 |
Ddx58 | Ifit2 | MGP_SPRETEiJ_P0064209 | MGP_SPRETEiJ_P0050607 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58. | Interferon-induced protein with tetratricopeptide repeats 2. | 0.865 |
Ddx58 | Parp9 | MGP_SPRETEiJ_P0064209 | MGP_SPRETEiJ_P0043321 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58. | Poly (ADP-ribose) polymerase family, member 9. | 0.838 |
Ddx58 | Samd9l | MGP_SPRETEiJ_P0064209 | MGP_SPRETEiJ_P0075260 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58. | Sterile alpha motif domain containing 9-like. | 0.665 |
Ddx58 | Stat1 | MGP_SPRETEiJ_P0064209 | MGP_SPRETEiJ_P0018546 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58. | Signal transducer and activator of transcription 1. | 0.954 |
Epsti1 | Ifi35 | MGP_SPRETEiJ_P0039198 | MGP_SPRETEiJ_P0031499 | Epithelial stromal interaction 1 (breast). | Interferon-induced protein 35. | 0.440 |
Epsti1 | Ifi44 | MGP_SPRETEiJ_P0039198 | MGP_SPRETEiJ_P0063458 | Epithelial stromal interaction 1 (breast). | Interferon-induced protein 44. | 0.841 |
Epsti1 | Ifi44l | MGP_SPRETEiJ_P0039198 | MGP_SPRETEiJ_P0063462 | Epithelial stromal interaction 1 (breast). | Interferon-induced protein 44 like. | 0.702 |
Epsti1 | Ifih1 | MGP_SPRETEiJ_P0039198 | MGP_SPRETEiJ_P0054047 | Epithelial stromal interaction 1 (breast). | Interferon induced with helicase C domain 1. | 0.787 |
Epsti1 | Parp9 | MGP_SPRETEiJ_P0039198 | MGP_SPRETEiJ_P0043321 | Epithelial stromal interaction 1 (breast). | Poly (ADP-ribose) polymerase family, member 9. | 0.803 |
Epsti1 | Samd9l | MGP_SPRETEiJ_P0039198 | MGP_SPRETEiJ_P0075260 | Epithelial stromal interaction 1 (breast). | Sterile alpha motif domain containing 9-like. | 0.786 |
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