STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MestMesoderm specific transcript. (342 aa)    
Predicted Functional Partners:
Snrpn
Small nuclear ribonucleoprotein N.
      
 0.730
Ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
   
 0.698
Palb2
Partner and localizer of BRCA2.
   
 0.698
Plagl1
Pleiomorphic adenoma gene-like 1.
      
 0.644
Igf2r
Insulin-like growth factor 2 receptor.
     
 0.628
Dlk1
Delta like non-canonical Notch ligand 1.
      
 0.625
MGP_SPRETEiJ_P0071406
annotation not available
    
 0.623
Nnat
Neuronatin.
      
 0.614
Grb10
Growth factor receptor bound protein 10.
      
 0.613
Bdh1
3-hydroxybutyrate dehydrogenase, type 1.
      
 0.608
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.