STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clec5aC-type lectin domain family 5, member a. (190 aa)    
Predicted Functional Partners:
Tyrobp
TYRO protein tyrosine kinase binding protein.
   
 0.975
Hcst
Hematopoietic cell signal transducer.
    
 0.854
MGP_SPRETEiJ_P0022205
annotation not available
   
 0.779
Syk
Spleen tyrosine kinase.
     
 0.708
Trem1
Triggering receptor expressed on myeloid cells 1.
   
  
 0.643
Clec4d
C-type lectin domain family 4, member d.
   
 
0.599
MGP_SPRETEiJ_P0079111
annotation not available
   
  
 0.584
MGP_SPRETEiJ_P0079112
annotation not available
   
  
 0.584
MGP_SPRETEiJ_P0079549
annotation not available
   
 0.532
Gtf2a2
General transcription factor II A, 2.
      
 0.514
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.