Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
App | Ctrb1 | MGP_SPRETEiJ_P0044003 | MGP_SPRETEiJ_P0089599 | Amyloid beta (A4) precursor protein. | Chymotrypsinogen B1. | 0.710 |
App | MGP_SPRETEiJ_P0076301 | MGP_SPRETEiJ_P0044003 | MGP_SPRETEiJ_P0076301 | Amyloid beta (A4) precursor protein. | annotation not available | 0.851 |
Ctrb1 | App | MGP_SPRETEiJ_P0089599 | MGP_SPRETEiJ_P0044003 | Chymotrypsinogen B1. | Amyloid beta (A4) precursor protein. | 0.710 |
Ctrb1 | MGP_SPRETEiJ_P0076301 | MGP_SPRETEiJ_P0089599 | MGP_SPRETEiJ_P0076301 | Chymotrypsinogen B1. | annotation not available | 0.601 |
Ctrb1 | Met | MGP_SPRETEiJ_P0089599 | MGP_SPRETEiJ_P0075528 | Chymotrypsinogen B1. | Met proto-oncogene. | 0.656 |
Ctrb1 | Mst1r | MGP_SPRETEiJ_P0089599 | MGP_SPRETEiJ_P0093519 | Chymotrypsinogen B1. | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | 0.656 |
Ctrb1 | Spink1 | MGP_SPRETEiJ_P0089599 | MGP_SPRETEiJ_P0048563 | Chymotrypsinogen B1. | Serine peptidase inhibitor, Kazal type 1. | 0.503 |
Ctrb1 | Tfpi | MGP_SPRETEiJ_P0089599 | MGP_SPRETEiJ_P0054671 | Chymotrypsinogen B1. | Tissue factor pathway inhibitor. | 0.437 |
F2r | F2rl1 | MGP_SPRETEiJ_P0036853 | MGP_SPRETEiJ_P0036852 | Coagulation factor II (thrombin) receptor. | Coagulation factor II (thrombin) receptor-like 1. | 0.672 |
F2r | F2rl3 | MGP_SPRETEiJ_P0036853 | MGP_SPRETEiJ_P0088536 | Coagulation factor II (thrombin) receptor. | Coagulation factor II (thrombin) receptor-like 3. | 0.936 |
F2r | MGP_SPRETEiJ_P0076301 | MGP_SPRETEiJ_P0036853 | MGP_SPRETEiJ_P0076301 | Coagulation factor II (thrombin) receptor. | annotation not available | 0.746 |
F2rl1 | F2r | MGP_SPRETEiJ_P0036852 | MGP_SPRETEiJ_P0036853 | Coagulation factor II (thrombin) receptor-like 1. | Coagulation factor II (thrombin) receptor. | 0.672 |
F2rl1 | MGP_SPRETEiJ_P0076301 | MGP_SPRETEiJ_P0036852 | MGP_SPRETEiJ_P0076301 | Coagulation factor II (thrombin) receptor-like 1. | annotation not available | 0.735 |
F2rl2 | MGP_SPRETEiJ_P0076301 | MGP_SPRETEiJ_P0036855 | MGP_SPRETEiJ_P0076301 | Coagulation factor II (thrombin) receptor-like 2. | annotation not available | 0.714 |
F2rl3 | F2r | MGP_SPRETEiJ_P0088536 | MGP_SPRETEiJ_P0036853 | Coagulation factor II (thrombin) receptor-like 3. | Coagulation factor II (thrombin) receptor. | 0.936 |
F2rl3 | MGP_SPRETEiJ_P0076301 | MGP_SPRETEiJ_P0088536 | MGP_SPRETEiJ_P0076301 | Coagulation factor II (thrombin) receptor-like 3. | annotation not available | 0.749 |
MGP_SPRETEiJ_P0076301 | App | MGP_SPRETEiJ_P0076301 | MGP_SPRETEiJ_P0044003 | annotation not available | Amyloid beta (A4) precursor protein. | 0.851 |
MGP_SPRETEiJ_P0076301 | Ctrb1 | MGP_SPRETEiJ_P0076301 | MGP_SPRETEiJ_P0089599 | annotation not available | Chymotrypsinogen B1. | 0.601 |
MGP_SPRETEiJ_P0076301 | F2r | MGP_SPRETEiJ_P0076301 | MGP_SPRETEiJ_P0036853 | annotation not available | Coagulation factor II (thrombin) receptor. | 0.746 |
MGP_SPRETEiJ_P0076301 | F2rl1 | MGP_SPRETEiJ_P0076301 | MGP_SPRETEiJ_P0036852 | annotation not available | Coagulation factor II (thrombin) receptor-like 1. | 0.735 |
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