STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atoh8Atonal bHLH transcription factor 8. (322 aa)    
Predicted Functional Partners:
Ppp3cb
Protein phosphatase 3, catalytic subunit, beta isoform.
    
 
 0.524
Olfml1
Olfactomedin-like 1.
      
 0.487
Mrgprf
MAS-related GPR, member F.
      
 0.463
Efemp2
Epidermal growth factor-containing fibulin-like extracellular matrix protein 2.
      
 0.461
Vgll3
Vestigial like family member 3.
      
 0.459
Prrx2
Paired related homeobox 2.
      
 0.454
Fkbp10
FK506 binding protein 10.
      
 0.453
Tcf24
Transcription factor 24.
    
 
 0.450
Copz2
Coatomer protein complex, subunit zeta 2.
      
 0.450
Tbc1d2b
TBC1 domain family, member 2B.
      
 0.429
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.