STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cyp26b1Cytochrome P450, family 26, subfamily b, polypeptide 1. (512 aa)    
Predicted Functional Partners:
Aldh1a2
Aldehyde dehydrogenase family 1, subfamily A2.
   
 
 0.975
Aldh1a3
Aldehyde dehydrogenase family 1, subfamily A3.
   
 
 0.974
Cyp1a2
Cytochrome P450, family 1, subfamily a, polypeptide 2.
  
  
0.958
MGP_SPRETEiJ_P0050365
annotation not available
   
 
 0.956
Cyp1a1
Cytochrome P450, family 1, subfamily a, polypeptide 1.
  
  
0.952
Cyp3a13
Cytochrome P450, family 3, subfamily a, polypeptide 13.
  
0.951
Cyp2c70
Cytochrome P450, family 2, subfamily c, polypeptide 70.
  
  
0.949
Cyp2c23
Cytochrome P450, family 2, subfamily c, polypeptide 23.
  
  
0.949
Cyp2s1
Cytochrome P450, family 2, subfamily s, polypeptide 1.
  
  
0.949
Cyp26a1
Cytochrome P450, family 26, subfamily a, polypeptide 1.
  
 
 
0.943
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.