STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Klf15Kruppel-like factor 15. (415 aa)    
Predicted Functional Partners:
Rps27a
Ribosomal protein S27A.
    
  0.682
MGP_SPRETEiJ_P0023847
annotation not available
    
  0.639
Ppara
Peroxisome proliferator activated receptor alpha.
   
 0.626
Cebpb
CCAAT/enhancer binding protein (C/EBP), beta.
    
 0.583
Arntl
Aryl hydrocarbon receptor nuclear translocator-like.
    
 0.571
Bcat2
Branched chain aminotransferase 2, mitochondrial.
      
 0.564
Foxo1
Forkhead box O1.
    
 0.521
Hmgcs2
3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2.
      
 0.509
MGP_SPRETEiJ_P0030876
annotation not available
    
  0.501
MGP_SPRETEiJ_P0088294
annotation not available
    
  0.501
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.