Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Abl2 | Lrtm2 | MGP_SPRETEiJ_P0021623 | MGP_SPRETEiJ_P0078860 | V-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene). | Leucine-rich repeats and transmembrane domains 2. | 0.523 |
Abl2 | Robo1 | MGP_SPRETEiJ_P0021623 | MGP_SPRETEiJ_P0043932 | V-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene). | Roundabout guidance receptor 1. | 0.678 |
Abl2 | Robo2 | MGP_SPRETEiJ_P0021623 | MGP_SPRETEiJ_P0043935 | V-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene). | Roundabout guidance receptor 2. | 0.659 |
Abl2 | Robo4 | MGP_SPRETEiJ_P0021623 | MGP_SPRETEiJ_P0090860 | V-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene). | Roundabout guidance receptor 4. | 0.637 |
Adgrl1 | Lrtm2 | MGP_SPRETEiJ_P0088687 | MGP_SPRETEiJ_P0078860 | Adhesion G protein-coupled receptor L1. | Leucine-rich repeats and transmembrane domains 2. | 0.835 |
Adgrl2 | Lrtm2 | MGP_SPRETEiJ_P0063432 | MGP_SPRETEiJ_P0078860 | Adhesion G protein-coupled receptor L2. | Leucine-rich repeats and transmembrane domains 2. | 0.835 |
Adgrl3 | Lrtm2 | MGP_SPRETEiJ_P0071472 | MGP_SPRETEiJ_P0078860 | Adhesion G protein-coupled receptor L3. | Leucine-rich repeats and transmembrane domains 2. | 0.835 |
Lrtm2 | Abl2 | MGP_SPRETEiJ_P0078860 | MGP_SPRETEiJ_P0021623 | Leucine-rich repeats and transmembrane domains 2. | V-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene). | 0.523 |
Lrtm2 | Adgrl1 | MGP_SPRETEiJ_P0078860 | MGP_SPRETEiJ_P0088687 | Leucine-rich repeats and transmembrane domains 2. | Adhesion G protein-coupled receptor L1. | 0.835 |
Lrtm2 | Adgrl2 | MGP_SPRETEiJ_P0078860 | MGP_SPRETEiJ_P0063432 | Leucine-rich repeats and transmembrane domains 2. | Adhesion G protein-coupled receptor L2. | 0.835 |
Lrtm2 | Adgrl3 | MGP_SPRETEiJ_P0078860 | MGP_SPRETEiJ_P0071472 | Leucine-rich repeats and transmembrane domains 2. | Adhesion G protein-coupled receptor L3. | 0.835 |
Lrtm2 | MGP_SPRETEiJ_P0091783 | MGP_SPRETEiJ_P0078860 | MGP_SPRETEiJ_P0091783 | Leucine-rich repeats and transmembrane domains 2. | annotation not available | 0.551 |
Lrtm2 | Myo9b | MGP_SPRETEiJ_P0078860 | MGP_SPRETEiJ_P0088362 | Leucine-rich repeats and transmembrane domains 2. | Myosin IXb. | 0.551 |
Lrtm2 | Ntng1 | MGP_SPRETEiJ_P0078860 | MGP_SPRETEiJ_P0062439 | Leucine-rich repeats and transmembrane domains 2. | Netrin G1. | 0.607 |
Lrtm2 | Robo1 | MGP_SPRETEiJ_P0078860 | MGP_SPRETEiJ_P0043932 | Leucine-rich repeats and transmembrane domains 2. | Roundabout guidance receptor 1. | 0.744 |
Lrtm2 | Robo2 | MGP_SPRETEiJ_P0078860 | MGP_SPRETEiJ_P0043935 | Leucine-rich repeats and transmembrane domains 2. | Roundabout guidance receptor 2. | 0.744 |
Lrtm2 | Robo4 | MGP_SPRETEiJ_P0078860 | MGP_SPRETEiJ_P0090860 | Leucine-rich repeats and transmembrane domains 2. | Roundabout guidance receptor 4. | 0.744 |
MGP_SPRETEiJ_P0091783 | Lrtm2 | MGP_SPRETEiJ_P0091783 | MGP_SPRETEiJ_P0078860 | annotation not available | Leucine-rich repeats and transmembrane domains 2. | 0.551 |
MGP_SPRETEiJ_P0091783 | Robo1 | MGP_SPRETEiJ_P0091783 | MGP_SPRETEiJ_P0043932 | annotation not available | Roundabout guidance receptor 1. | 0.627 |
MGP_SPRETEiJ_P0091783 | Robo2 | MGP_SPRETEiJ_P0091783 | MGP_SPRETEiJ_P0043935 | annotation not available | Roundabout guidance receptor 2. | 0.627 |
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