STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clec4a4C-type lectin domain family 4, member a4. (237 aa)    
Predicted Functional Partners:
MGP_SPRETEiJ_P0022205
annotation not available
   
 0.704
Ly75
Lymphocyte antigen 75.
      
 0.659
Ptpn11
Protein tyrosine phosphatase, non-receptor type 11.
    
 0.652
Clec9a
C-type lectin domain family 9, member a.
      
 0.613
Xcr1
Chemokine (C motif) receptor 1.
   
  
 0.524
Clec4d
C-type lectin domain family 4, member d.
  
 
0.520
Batf3
Basic leucine zipper transcription factor, ATF-like 3.
   
  
 0.491
Syk
Spleen tyrosine kinase.
   
 
 0.482
Clec5a
C-type lectin domain family 5, member a.
   
  
 0.479
Tyrobp
TYRO protein tyrosine kinase binding protein.
   
 0.471
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.