STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_SPRETEiJ_P0079130annotation not available (390 aa)    
Predicted Functional Partners:
Wdr90
WD repeat domain 90.
    
   0.611
MGP_SPRETEiJ_P0080755
annotation not available
      
 0.493
Nme8
NME/NM23 family member 8.
    
  0.457
Nr4a1
Nuclear receptor subfamily 4, group A, member 1.
      
 0.457
Vmn1r224
Vomeronasal 1 receptor 224.
      
 0.457
Egr1
Early growth response 1.
      
 0.457
Fosb
FBJ osteosarcoma oncogene B.
      
 0.457
Trio
Triple functional domain (PTPRF interacting).
    
  0.430
MGP_SPRETEiJ_P0043271
annotation not available
    
  0.430
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.