STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sox5SRY (sex determining region Y)-box 5. (763 aa)    
Predicted Functional Partners:
Sox6
SRY (sex determining region Y)-box 6.
  
 
 
0.876
Ctnnb1
Catenin (cadherin associated protein), beta 1.
   
 0.806
Tcf7
Transcription factor 7, T cell specific.
     
0.747
Fezf2
Fez family zinc finger 2.
    
 
 0.673
Sox13
SRY (sex determining region Y)-box 13.
    
 
0.647
Cep85
Centrosomal protein 85.
    
   0.625
Satb2
Special AT-rich sequence binding protein 2.
      
 0.618
Qsox1
Quiescin Q6 sulfhydryl oxidase 1.
      
 0.616
Col2a1
Collagen, type II, alpha 1.
      
 0.612
Acan
Aggrecan.
    
 
 0.611
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.