Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dennd3 | Dennd5b | MGP_SPRETEiJ_P0040210 | MGP_SPRETEiJ_P0080236 | DENN/MADD domain containing 3. | DENN/MADD domain containing 5B. | 0.720 |
Dennd3 | MGP_SPRETEiJ_P0047300 | MGP_SPRETEiJ_P0040210 | MGP_SPRETEiJ_P0047300 | DENN/MADD domain containing 3. | annotation not available | 0.443 |
Dennd3 | Vps35 | MGP_SPRETEiJ_P0040210 | MGP_SPRETEiJ_P0088898 | DENN/MADD domain containing 3. | VPS35 retromer complex component. | 0.431 |
Dennd4a | Dennd5b | MGP_SPRETEiJ_P0091956 | MGP_SPRETEiJ_P0080236 | DENN/MADD domain containing 4A. | DENN/MADD domain containing 5B. | 0.590 |
Dennd4a | Rab7 | MGP_SPRETEiJ_P0091956 | MGP_SPRETEiJ_P0077870 | DENN/MADD domain containing 4A. | RAB7, member RAS oncogene family. | 0.531 |
Dennd4a | Vps35 | MGP_SPRETEiJ_P0091956 | MGP_SPRETEiJ_P0088898 | DENN/MADD domain containing 4A. | VPS35 retromer complex component. | 0.522 |
Dennd4b | Dennd5b | MGP_SPRETEiJ_P0061171 | MGP_SPRETEiJ_P0080236 | DENN/MADD domain containing 4B. | DENN/MADD domain containing 5B. | 0.685 |
Dennd4b | MGP_SPRETEiJ_P0047300 | MGP_SPRETEiJ_P0061171 | MGP_SPRETEiJ_P0047300 | DENN/MADD domain containing 4B. | annotation not available | 0.515 |
Dennd4b | Rab7 | MGP_SPRETEiJ_P0061171 | MGP_SPRETEiJ_P0077870 | DENN/MADD domain containing 4B. | RAB7, member RAS oncogene family. | 0.531 |
Dennd4b | Vps35 | MGP_SPRETEiJ_P0061171 | MGP_SPRETEiJ_P0088898 | DENN/MADD domain containing 4B. | VPS35 retromer complex component. | 0.518 |
Dennd4c | Dennd5b | MGP_SPRETEiJ_P0065354 | MGP_SPRETEiJ_P0080236 | DENN/MADD domain containing 4C. | DENN/MADD domain containing 5B. | 0.878 |
Dennd4c | Rab7 | MGP_SPRETEiJ_P0065354 | MGP_SPRETEiJ_P0077870 | DENN/MADD domain containing 4C. | RAB7, member RAS oncogene family. | 0.879 |
Dennd4c | Snx2 | MGP_SPRETEiJ_P0065354 | MGP_SPRETEiJ_P0048681 | DENN/MADD domain containing 4C. | Sorting nexin 2. | 0.904 |
Dennd4c | Vps35 | MGP_SPRETEiJ_P0065354 | MGP_SPRETEiJ_P0088898 | DENN/MADD domain containing 4C. | VPS35 retromer complex component. | 0.947 |
Dennd5b | Dennd3 | MGP_SPRETEiJ_P0080236 | MGP_SPRETEiJ_P0040210 | DENN/MADD domain containing 5B. | DENN/MADD domain containing 3. | 0.720 |
Dennd5b | Dennd4a | MGP_SPRETEiJ_P0080236 | MGP_SPRETEiJ_P0091956 | DENN/MADD domain containing 5B. | DENN/MADD domain containing 4A. | 0.590 |
Dennd5b | Dennd4b | MGP_SPRETEiJ_P0080236 | MGP_SPRETEiJ_P0061171 | DENN/MADD domain containing 5B. | DENN/MADD domain containing 4B. | 0.685 |
Dennd5b | Dennd4c | MGP_SPRETEiJ_P0080236 | MGP_SPRETEiJ_P0065354 | DENN/MADD domain containing 5B. | DENN/MADD domain containing 4C. | 0.878 |
Dennd5b | MGP_SPRETEiJ_P0047300 | MGP_SPRETEiJ_P0080236 | MGP_SPRETEiJ_P0047300 | DENN/MADD domain containing 5B. | annotation not available | 0.538 |
Dennd5b | Rab7 | MGP_SPRETEiJ_P0080236 | MGP_SPRETEiJ_P0077870 | DENN/MADD domain containing 5B. | RAB7, member RAS oncogene family. | 0.718 |
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