STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zfp446Zinc finger protein 446. (523 aa)    
Predicted Functional Partners:
MGP_SPRETEiJ_P0035356
annotation not available
    
   0.701
Zkscan16
Zinc finger with KRAB and SCAN domains 16.
  
 
  
0.658
MGP_SPRETEiJ_P0023847
annotation not available
    
  0.639
Zfp397
Zinc finger protein 397.
  
 
  
0.632
MGP_SPRETEiJ_P0056183
annotation not available
    
  
0.615
Zscan22
Zinc finger and SCAN domain containing 22.
    
  
0.606
Agmo
Alkylglycerol monooxygenase.
    
 
 0.522
Bhmt2
Betaine-homocysteine methyltransferase 2.
      
 0.508
Cacybp
Calcyclin binding protein.
      
 0.461
Zkscan6
Zinc finger with KRAB and SCAN domains 6.
    
  
0.456
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.