STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_SPRETEiJ_P0081034annotation not available (208 aa)    
Predicted Functional Partners:
Tmem126a
Transmembrane protein 126A.
      
 0.567
Spg7
SPG7, paraplegin matrix AAA peptidase subunit.
   
 
 0.494
Prr5
Proline rich 5 (renal).
      
 0.471
Wfs1
Wolframin ER transmembrane glycoprotein.
      
 0.445
Rab3ip
RAB3A interacting protein.
      
 0.442
Mfn2
Mitofusin 2.
      
 0.433
Ciao1
Cytosolic iron-sulfur protein assembly 1.
      
 0.432
Dnajc19
DnaJ heat shock protein family (Hsp40) member C19.
      
 0.432
Afg3l2
AFG3-like AAA ATPase 2.
   
 
 0.425
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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