STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IrgqImmunity-related GTPase family, Q. (583 aa)    
Predicted Functional Partners:
Ttc9b
Tetratricopeptide repeat domain 9B.
    
 
 0.531
Abracl
ABRA C-terminal like.
      
 0.517
Tulp2
Tubby-like protein 2.
     
 0.514
Dmac2
Distal membrane arm assembly complex 2.
      
 0.513
N4bp2l2
NEDD4 binding protein 2-like 2.
      
 0.508
Cask
Calcium/calmodulin-dependent serine protein kinase (MAGUK family).
   
  0.506
Reps1
RalBP1 associated Eps domain containing protein.
      
 0.505
Pla2g4a
Phospholipase A2, group IVA (cytosolic, calcium-dependent).
     
 0.492
Mex3b
Mex3 RNA binding family member B.
    
 
 0.482
Cpne1
Copine I.
   
  
 0.463
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.