STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nlrp4aNLR family, pyrin domain containing 4A. (982 aa)    
Predicted Functional Partners:
Dtx4
Deltex 4, E3 ubiquitin ligase.
    
 0.618
Dtx1
Deltex 1, E3 ubiquitin ligase.
    
 0.536
Dtx2
Deltex 2, E3 ubiquitin ligase.
    
 0.524
Pycard
PYD and CARD domain containing.
    
 0.474
Nlrp2
NLR family, pyrin domain containing 2.
  
 
0.451
Rnase1
Ribonuclease, RNase A family, 1 (pancreatic).
    
   0.441
Fcamr
Fc receptor, IgA, IgM, high affinity.
  
 
   0.413
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.