STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sptbn4Spectrin beta, non-erythrocytic 4. (2608 aa)    
Predicted Functional Partners:
MGP_SPRETEiJ_P0024436
annotation not available
   
 0.995
Spta1
Spectrin alpha, erythrocytic 1.
   
0.983
Sptan1
Spectrin alpha, non-erythrocytic 1.
   
0.966
MGP_SPRETEiJ_P0062805
annotation not available
   
 0.932
Ank1
Ankyrin 1, erythroid.
   
 0.872
Cmtm7
CKLF-like MARVEL transmembrane domain containing 7.
      
 0.774
Itsn2
Intersectin 2.
     
 0.740
MGP_SPRETEiJ_P0040369
annotation not available
   
 0.715
Ankrd60
Ankyrin repeat domain 60.
   
 0.715
Itsn1
Intersectin 1 (SH3 domain protein 1A).
     
 0.656
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.