STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbxo27F-box protein 27. (280 aa)    
Predicted Functional Partners:
Skp1a
S-phase kinase-associated protein 1A.
    
 0.910
Cul1
Cullin 1.
    
 0.842
Trim16
Tripartite motif-containing 16.
    
 0.646
Rbx1
Ring-box 1.
    
 0.599
Cops5
COP9 signalosome subunit 5.
    
  0.549
Cops4
COP9 signalosome subunit 4.
    
  0.549
Nedd8
Neural precursor cell expressed, developmentally down-regulated gene 8.
    
  0.539
MGP_SPRETEiJ_P0036504
annotation not available
      
 0.537
Cul3
Cullin 3.
    
 0.521
Fbxo4
F-box protein 4.
     
 0.513
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.