Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Capn1 | Capn2 | MGP_SPRETEiJ_P0049662 | MGP_SPRETEiJ_P0022788 | Calpain 1. | Calpain 2. | 0.972 |
Capn1 | Capn8 | MGP_SPRETEiJ_P0049662 | MGP_SPRETEiJ_P0022796 | Calpain 1. | Calpain 8. | 0.758 |
Capn1 | Capns1 | MGP_SPRETEiJ_P0049662 | MGP_SPRETEiJ_P0081912 | Calpain 1. | Calpain, small subunit 1. | 0.965 |
Capn1 | Cast | MGP_SPRETEiJ_P0049662 | MGP_SPRETEiJ_P0036581 | Calpain 1. | Calpastatin. | 0.980 |
Capn10 | Capns1 | MGP_SPRETEiJ_P0020181 | MGP_SPRETEiJ_P0081912 | Calpain 10. | Calpain, small subunit 1. | 0.795 |
Capn10 | Cast | MGP_SPRETEiJ_P0020181 | MGP_SPRETEiJ_P0036581 | Calpain 10. | Calpastatin. | 0.832 |
Capn13 | Capns1 | MGP_SPRETEiJ_P0047516 | MGP_SPRETEiJ_P0081912 | Calpain 13. | Calpain, small subunit 1. | 0.816 |
Capn13 | Cast | MGP_SPRETEiJ_P0047516 | MGP_SPRETEiJ_P0036581 | Calpain 13. | Calpastatin. | 0.870 |
Capn2 | Capn1 | MGP_SPRETEiJ_P0022788 | MGP_SPRETEiJ_P0049662 | Calpain 2. | Calpain 1. | 0.972 |
Capn2 | Capns1 | MGP_SPRETEiJ_P0022788 | MGP_SPRETEiJ_P0081912 | Calpain 2. | Calpain, small subunit 1. | 0.999 |
Capn2 | Casp6 | MGP_SPRETEiJ_P0022788 | MGP_SPRETEiJ_P0062903 | Calpain 2. | Caspase 6. | 0.911 |
Capn2 | Cast | MGP_SPRETEiJ_P0022788 | MGP_SPRETEiJ_P0036581 | Calpain 2. | Calpastatin. | 0.998 |
Capn5 | Capns1 | MGP_SPRETEiJ_P0084141 | MGP_SPRETEiJ_P0081912 | Calpain 5. | Calpain, small subunit 1. | 0.859 |
Capn5 | Cast | MGP_SPRETEiJ_P0084141 | MGP_SPRETEiJ_P0036581 | Calpain 5. | Calpastatin. | 0.807 |
Capn6 | Capns1 | MGP_SPRETEiJ_P0096682 | MGP_SPRETEiJ_P0081912 | Calpain 6. | Calpain, small subunit 1. | 0.852 |
Capn6 | Cast | MGP_SPRETEiJ_P0096682 | MGP_SPRETEiJ_P0036581 | Calpain 6. | Calpastatin. | 0.804 |
Capn7 | Capns1 | MGP_SPRETEiJ_P0037786 | MGP_SPRETEiJ_P0081912 | Calpain 7. | Calpain, small subunit 1. | 0.792 |
Capn7 | Cast | MGP_SPRETEiJ_P0037786 | MGP_SPRETEiJ_P0036581 | Calpain 7. | Calpastatin. | 0.770 |
Capn8 | Capn1 | MGP_SPRETEiJ_P0022796 | MGP_SPRETEiJ_P0049662 | Calpain 8. | Calpain 1. | 0.758 |
Capn8 | Capns1 | MGP_SPRETEiJ_P0022796 | MGP_SPRETEiJ_P0081912 | Calpain 8. | Calpain, small subunit 1. | 0.855 |
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