Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
5031439G07Rik | Cep104 | MGP_SPRETEiJ_P0041126 | MGP_SPRETEiJ_P0068713 | RIKEN cDNA 5031439G07 gene. | Centrosomal protein 104. | 0.612 |
5031439G07Rik | Dpy19l3 | MGP_SPRETEiJ_P0041126 | MGP_SPRETEiJ_P0082388 | RIKEN cDNA 5031439G07 gene. | Dpy-19-like 3 (C. elegans). | 0.619 |
5031439G07Rik | Pigh | MGP_SPRETEiJ_P0041126 | MGP_SPRETEiJ_P0034146 | RIKEN cDNA 5031439G07 gene. | Phosphatidylinositol glycan anchor biosynthesis, class H. | 0.614 |
5031439G07Rik | Rtkn2 | MGP_SPRETEiJ_P0041126 | MGP_SPRETEiJ_P0024368 | RIKEN cDNA 5031439G07 gene. | Rhotekin 2. | 0.564 |
5031439G07Rik | Usp6nl | MGP_SPRETEiJ_P0041126 | MGP_SPRETEiJ_P0051492 | RIKEN cDNA 5031439G07 gene. | USP6 N-terminal like. | 0.613 |
Casc1 | Dpy19l3 | MGP_SPRETEiJ_P0080066 | MGP_SPRETEiJ_P0082388 | Cancer susceptibility candidate 1. | Dpy-19-like 3 (C. elegans). | 0.463 |
Ccdc126 | Dpy19l3 | MGP_SPRETEiJ_P0076629 | MGP_SPRETEiJ_P0082388 | Coiled-coil domain containing 126. | Dpy-19-like 3 (C. elegans). | 0.432 |
Cep104 | 5031439G07Rik | MGP_SPRETEiJ_P0068713 | MGP_SPRETEiJ_P0041126 | Centrosomal protein 104. | RIKEN cDNA 5031439G07 gene. | 0.612 |
Cep104 | Dpy19l3 | MGP_SPRETEiJ_P0068713 | MGP_SPRETEiJ_P0082388 | Centrosomal protein 104. | Dpy-19-like 3 (C. elegans). | 0.508 |
Cep104 | Pigh | MGP_SPRETEiJ_P0068713 | MGP_SPRETEiJ_P0034146 | Centrosomal protein 104. | Phosphatidylinositol glycan anchor biosynthesis, class H. | 0.505 |
Cep104 | Rtkn2 | MGP_SPRETEiJ_P0068713 | MGP_SPRETEiJ_P0024368 | Centrosomal protein 104. | Rhotekin 2. | 0.400 |
Cep104 | Usp6nl | MGP_SPRETEiJ_P0068713 | MGP_SPRETEiJ_P0051492 | Centrosomal protein 104. | USP6 N-terminal like. | 0.429 |
Dpy19l3 | 5031439G07Rik | MGP_SPRETEiJ_P0082388 | MGP_SPRETEiJ_P0041126 | Dpy-19-like 3 (C. elegans). | RIKEN cDNA 5031439G07 gene. | 0.619 |
Dpy19l3 | Casc1 | MGP_SPRETEiJ_P0082388 | MGP_SPRETEiJ_P0080066 | Dpy-19-like 3 (C. elegans). | Cancer susceptibility candidate 1. | 0.463 |
Dpy19l3 | Ccdc126 | MGP_SPRETEiJ_P0082388 | MGP_SPRETEiJ_P0076629 | Dpy-19-like 3 (C. elegans). | Coiled-coil domain containing 126. | 0.432 |
Dpy19l3 | Cep104 | MGP_SPRETEiJ_P0082388 | MGP_SPRETEiJ_P0068713 | Dpy-19-like 3 (C. elegans). | Centrosomal protein 104. | 0.508 |
Dpy19l3 | Pigh | MGP_SPRETEiJ_P0082388 | MGP_SPRETEiJ_P0034146 | Dpy-19-like 3 (C. elegans). | Phosphatidylinositol glycan anchor biosynthesis, class H. | 0.517 |
Dpy19l3 | Rtkn2 | MGP_SPRETEiJ_P0082388 | MGP_SPRETEiJ_P0024368 | Dpy-19-like 3 (C. elegans). | Rhotekin 2. | 0.457 |
Dpy19l3 | Tsr1 | MGP_SPRETEiJ_P0082388 | MGP_SPRETEiJ_P0029588 | Dpy-19-like 3 (C. elegans). | TSR1 20S rRNA accumulation. | 0.441 |
Dpy19l3 | Tsr2 | MGP_SPRETEiJ_P0082388 | MGP_SPRETEiJ_P0096795 | Dpy-19-like 3 (C. elegans). | TSR2 20S rRNA accumulation. | 0.507 |
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