STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lins1Lines homolog 1. (768 aa)    
Predicted Functional Partners:
Acer1
Alkaline ceramidase 1.
    
 0.552
Kdsr
3-ketodihydrosphingosine reductase.
     
 0.519
Smpd2
Sphingomyelin phosphodiesterase 2, neutral.
     
 0.518
Ugcg
UDP-glucose ceramide glucosyltransferase.
     
 0.512
Asah2
N-acylsphingosine amidohydrolase 2.
     
 0.511
Sgpp2
Sphingosine-1-phosphate phosphotase 2.
    
 0.477
Sgpp1
Sphingosine-1-phosphate phosphatase 1.
    
 0.477
Gba2
Glucosidase beta 2.
     
 0.461
Olfr183
Olfactory receptor 183.
      
 0.457
Acer2
Alkaline ceramidase 2.
    
 0.439
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.