STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arap1ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1. (1452 aa)    
Predicted Functional Partners:
Ptk6
PTK6 protein tyrosine kinase 6.
   
 
  0.953
Sh3kbp1
SH3-domain kinase binding protein 1.
    
 
 0.845
Inppl1
Inositol polyphosphate phosphatase-like 1.
   
 0.622
Agtrap
Angiotensin II, type I receptor-associated protein.
      
 0.619
Fyn
Fyn proto-oncogene.
   
 
  0.599
Srms
Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites.
   
 
  0.599
Cdc42
Cell division cycle 42.
    
 0.569
Smap2
Small ArfGAP 2.
     
0.566
Asap3
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
    
0.566
4930544G11Rik
RIKEN cDNA 4930544G11 gene.
    
 0.565
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.