Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Banf1 | Emd | MGP_SPRETEiJ_P0049550 | MGP_SPRETEiJ_P0095605 | Barrier to autointegration factor 1. | Emerin. | 0.999 |
Banf1 | Lemd3 | MGP_SPRETEiJ_P0049550 | MGP_SPRETEiJ_P0026158 | Barrier to autointegration factor 1. | LEM domain containing 3. | 0.988 |
Banf1 | Lmntd2 | MGP_SPRETEiJ_P0049550 | MGP_SPRETEiJ_P0086569 | Barrier to autointegration factor 1. | Lamin tail domain containing 2. | 0.597 |
Banf1 | Rbm39 | MGP_SPRETEiJ_P0049550 | MGP_SPRETEiJ_P0057794 | Barrier to autointegration factor 1. | RNA binding motif protein 39. | 0.860 |
Banf2 | Emd | MGP_SPRETEiJ_P0057080 | MGP_SPRETEiJ_P0095605 | Barrier to autointegration factor 2. | Emerin. | 0.998 |
Banf2 | Lemd3 | MGP_SPRETEiJ_P0057080 | MGP_SPRETEiJ_P0026158 | Barrier to autointegration factor 2. | LEM domain containing 3. | 0.954 |
Banf2 | Lmntd2 | MGP_SPRETEiJ_P0057080 | MGP_SPRETEiJ_P0086569 | Barrier to autointegration factor 2. | Lamin tail domain containing 2. | 0.597 |
Banf2 | Rbm39 | MGP_SPRETEiJ_P0057080 | MGP_SPRETEiJ_P0057794 | Barrier to autointegration factor 2. | RNA binding motif protein 39. | 0.788 |
Ehbp1l1 | Lmntd2 | MGP_SPRETEiJ_P0049626 | MGP_SPRETEiJ_P0086569 | EH domain binding protein 1-like 1. | Lamin tail domain containing 2. | 0.499 |
Ehbp1l1 | Tcap | MGP_SPRETEiJ_P0049626 | MGP_SPRETEiJ_P0031068 | EH domain binding protein 1-like 1. | Titin-cap. | 0.449 |
Emd | Banf1 | MGP_SPRETEiJ_P0095605 | MGP_SPRETEiJ_P0049550 | Emerin. | Barrier to autointegration factor 1. | 0.999 |
Emd | Banf2 | MGP_SPRETEiJ_P0095605 | MGP_SPRETEiJ_P0057080 | Emerin. | Barrier to autointegration factor 2. | 0.998 |
Emd | Lemd3 | MGP_SPRETEiJ_P0095605 | MGP_SPRETEiJ_P0026158 | Emerin. | LEM domain containing 3. | 0.928 |
Emd | Lmntd2 | MGP_SPRETEiJ_P0095605 | MGP_SPRETEiJ_P0086569 | Emerin. | Lamin tail domain containing 2. | 0.643 |
Emd | Rbm39 | MGP_SPRETEiJ_P0095605 | MGP_SPRETEiJ_P0057794 | Emerin. | RNA binding motif protein 39. | 0.958 |
H2-Oa | Lmntd2 | MGP_SPRETEiJ_P0046043 | MGP_SPRETEiJ_P0086569 | Histocompatibility 2, O region alpha locus. | Lamin tail domain containing 2. | 0.585 |
Lemd3 | Banf1 | MGP_SPRETEiJ_P0026158 | MGP_SPRETEiJ_P0049550 | LEM domain containing 3. | Barrier to autointegration factor 1. | 0.988 |
Lemd3 | Banf2 | MGP_SPRETEiJ_P0026158 | MGP_SPRETEiJ_P0057080 | LEM domain containing 3. | Barrier to autointegration factor 2. | 0.954 |
Lemd3 | Emd | MGP_SPRETEiJ_P0026158 | MGP_SPRETEiJ_P0095605 | LEM domain containing 3. | Emerin. | 0.928 |
Lemd3 | Lmntd2 | MGP_SPRETEiJ_P0026158 | MGP_SPRETEiJ_P0086569 | LEM domain containing 3. | Lamin tail domain containing 2. | 0.528 |
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