STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Muc5acMucin 5, subtypes A and C, tracheobronchial/gastric. (3042 aa)    
Predicted Functional Partners:
Fau
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).
   
  0.911
MGP_SPRETEiJ_P0049674
annotation not available
   
  0.911
Gp1ba
Glycoprotein 1b, alpha polypeptide.
    
 0.855
Muc1
Mucin 1, transmembrane.
   
 
 0.684
F5
Coagulation factor V.
    
 0.669
Gle1
GLE1 RNA export mediator (yeast).
    
 0.662
Gp1bb
Glycoprotein Ib, beta polypeptide.
   
 0.641
Gp9
Glycoprotein 9 (platelet).
   
 0.638
Nup214
Nucleoporin 214.
    
 0.637
Aaas
Achalasia, adrenocortical insufficiency, alacrimia.
    
 0.628
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.