Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ankrd13a | Zfp358 | MGP_SPRETEiJ_P0072732 | MGP_SPRETEiJ_P0087002 | Ankyrin repeat domain 13a. | Zinc finger protein 358. | 0.430 |
Ccdc85b | Zfp358 | MGP_SPRETEiJ_P0049567 | MGP_SPRETEiJ_P0087002 | Coiled-coil domain containing 85B. | Zinc finger protein 358. | 0.465 |
Ddx28 | Zfp358 | MGP_SPRETEiJ_P0089371 | MGP_SPRETEiJ_P0087002 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | Zinc finger protein 358. | 0.434 |
Kdm4a | Kdm4b | MGP_SPRETEiJ_P0066485 | MGP_SPRETEiJ_P0047222 | Lysine (K)-specific demethylase 4A. | Lysine (K)-specific demethylase 4B. | 0.703 |
Kdm4a | Zfp358 | MGP_SPRETEiJ_P0066485 | MGP_SPRETEiJ_P0087002 | Lysine (K)-specific demethylase 4A. | Zinc finger protein 358. | 0.421 |
Kdm4b | Kdm4a | MGP_SPRETEiJ_P0047222 | MGP_SPRETEiJ_P0066485 | Lysine (K)-specific demethylase 4B. | Lysine (K)-specific demethylase 4A. | 0.703 |
Kdm4b | Zfp358 | MGP_SPRETEiJ_P0047222 | MGP_SPRETEiJ_P0087002 | Lysine (K)-specific demethylase 4B. | Zinc finger protein 358. | 0.531 |
MGP_SPRETEiJ_P0023847 | Ttc8 | MGP_SPRETEiJ_P0023847 | MGP_SPRETEiJ_P0034592 | annotation not available | Tetratricopeptide repeat domain 8. | 0.566 |
MGP_SPRETEiJ_P0023847 | Zfp358 | MGP_SPRETEiJ_P0023847 | MGP_SPRETEiJ_P0087002 | annotation not available | Zinc finger protein 358. | 0.639 |
Ttc8 | MGP_SPRETEiJ_P0023847 | MGP_SPRETEiJ_P0034592 | MGP_SPRETEiJ_P0023847 | Tetratricopeptide repeat domain 8. | annotation not available | 0.566 |
Ttc8 | Zfp358 | MGP_SPRETEiJ_P0034592 | MGP_SPRETEiJ_P0087002 | Tetratricopeptide repeat domain 8. | Zinc finger protein 358. | 0.478 |
Zfp358 | Ankrd13a | MGP_SPRETEiJ_P0087002 | MGP_SPRETEiJ_P0072732 | Zinc finger protein 358. | Ankyrin repeat domain 13a. | 0.430 |
Zfp358 | Ccdc85b | MGP_SPRETEiJ_P0087002 | MGP_SPRETEiJ_P0049567 | Zinc finger protein 358. | Coiled-coil domain containing 85B. | 0.465 |
Zfp358 | Ddx28 | MGP_SPRETEiJ_P0087002 | MGP_SPRETEiJ_P0089371 | Zinc finger protein 358. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | 0.434 |
Zfp358 | Kdm4a | MGP_SPRETEiJ_P0087002 | MGP_SPRETEiJ_P0066485 | Zinc finger protein 358. | Lysine (K)-specific demethylase 4A. | 0.421 |
Zfp358 | Kdm4b | MGP_SPRETEiJ_P0087002 | MGP_SPRETEiJ_P0047222 | Zinc finger protein 358. | Lysine (K)-specific demethylase 4B. | 0.531 |
Zfp358 | MGP_SPRETEiJ_P0023847 | MGP_SPRETEiJ_P0087002 | MGP_SPRETEiJ_P0023847 | Zinc finger protein 358. | annotation not available | 0.639 |
Zfp358 | Ttc8 | MGP_SPRETEiJ_P0087002 | MGP_SPRETEiJ_P0034592 | Zinc finger protein 358. | Tetratricopeptide repeat domain 8. | 0.478 |