Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cul1 | Cul2 | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0047845 | Cullin 1. | Cullin 2. | 0.766 |
Cul1 | Cul3 | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0019645 | Cullin 1. | Cullin 3. | 0.779 |
Cul1 | Cul4a | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0087241 | Cullin 1. | Cullin 4A. | 0.926 |
Cul1 | Cul5 | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0091483 | Cullin 1. | Cullin 5. | 0.791 |
Cul1 | Dcun1d2 | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0087254 | Cullin 1. | DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae). | 0.946 |
Cul1 | MGP_SPRETEiJ_P0033634 | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0033634 | Cullin 1. | annotation not available | 0.932 |
Cul1 | Nedd8 | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0038607 | Cullin 1. | Neural precursor cell expressed, developmentally down-regulated gene 8. | 0.997 |
Cul1 | Rbx1 | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0040903 | Cullin 1. | Ring-box 1. | 0.999 |
Cul1 | Ube2f | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0020069 | Cullin 1. | Ubiquitin-conjugating enzyme E2F (putative). | 0.932 |
Cul1 | Ube2m | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0080743 | Cullin 1. | Ubiquitin-conjugating enzyme E2M. | 0.983 |
Cul2 | Cul1 | MGP_SPRETEiJ_P0047845 | MGP_SPRETEiJ_P0076441 | Cullin 2. | Cullin 1. | 0.766 |
Cul2 | Cul3 | MGP_SPRETEiJ_P0047845 | MGP_SPRETEiJ_P0019645 | Cullin 2. | Cullin 3. | 0.918 |
Cul2 | Cul4a | MGP_SPRETEiJ_P0047845 | MGP_SPRETEiJ_P0087241 | Cullin 2. | Cullin 4A. | 0.711 |
Cul2 | Cul5 | MGP_SPRETEiJ_P0047845 | MGP_SPRETEiJ_P0091483 | Cullin 2. | Cullin 5. | 0.900 |
Cul2 | Dcun1d2 | MGP_SPRETEiJ_P0047845 | MGP_SPRETEiJ_P0087254 | Cullin 2. | DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae). | 0.830 |
Cul2 | MGP_SPRETEiJ_P0033634 | MGP_SPRETEiJ_P0047845 | MGP_SPRETEiJ_P0033634 | Cullin 2. | annotation not available | 0.707 |
Cul2 | Nedd8 | MGP_SPRETEiJ_P0047845 | MGP_SPRETEiJ_P0038607 | Cullin 2. | Neural precursor cell expressed, developmentally down-regulated gene 8. | 0.989 |
Cul2 | Rbx1 | MGP_SPRETEiJ_P0047845 | MGP_SPRETEiJ_P0040903 | Cullin 2. | Ring-box 1. | 0.999 |
Cul2 | Ube2f | MGP_SPRETEiJ_P0047845 | MGP_SPRETEiJ_P0020069 | Cullin 2. | Ubiquitin-conjugating enzyme E2F (putative). | 0.707 |
Cul2 | Ube2m | MGP_SPRETEiJ_P0047845 | MGP_SPRETEiJ_P0080743 | Cullin 2. | Ubiquitin-conjugating enzyme E2M. | 0.822 |
page 1 of 6