STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AY761185cDNA sequence AY761185. (91 aa)    
Predicted Functional Partners:
Defb4
Defensin beta 4.
     
 0.802
Defb14
Defensin beta 14.
     
 0.801
Defb6
Defensin beta 6.
     
 0.689
Defb46
Defensin beta 46.
     
 0.689
Defb3
Defensin beta 3.
     
 0.689
Defb48
Defensin beta 48.
     
 0.550
Gm6040
Predicted gene 6040.
      
 0.516
Cstdc2
Cystatin domain containing 2.
      
 0.510
Lcn9
Lipocalin 9.
      
 0.436
Zfpm1
Zinc finger protein, multitype 1.
    
   0.434
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.