STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpm4Tropomyosin 4. (248 aa)    
Predicted Functional Partners:
Tnnt2
Troponin T2, cardiac.
   
 0.957
Tnni3
Troponin I, cardiac 3.
   
 0.943
Actc1
Actin, alpha, cardiac muscle 1.
   
 0.910
Myl1
Myosin, light polypeptide 1.
   
 0.904
Myh9
Myosin, heavy polypeptide 9, non-muscle.
   
 0.828
Tnnt1
Troponin T1, skeletal, slow.
   
 0.826
Tnnt3
Troponin T3, skeletal, fast.
   
 0.826
Tnni2
Troponin I, skeletal, fast 2.
   
 0.817
Tnni1
Troponin I, skeletal, slow 1.
   
 0.804
Tpm1
Tropomyosin 1, alpha.
  
0.802
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.