Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cnot1 | Ddx4 | MGP_SPRETEiJ_P0089189 | MGP_SPRETEiJ_P0037172 | CCR4-NOT transcription complex, subunit 1. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 4. | 0.510 |
Cnot1 | Dnd1 | MGP_SPRETEiJ_P0089189 | MGP_SPRETEiJ_P0048344 | CCR4-NOT transcription complex, subunit 1. | DND microRNA-mediated repression inhibitor 1. | 0.604 |
Cnot1 | Nanos3 | MGP_SPRETEiJ_P0089189 | MGP_SPRETEiJ_P0088725 | CCR4-NOT transcription complex, subunit 1. | Nanos C2HC-type zinc finger 3. | 0.757 |
Cnot1 | Pum1 | MGP_SPRETEiJ_P0089189 | MGP_SPRETEiJ_P0067269 | CCR4-NOT transcription complex, subunit 1. | Pumilio RNA-binding family member 1. | 0.540 |
Cnot1 | Pum2 | MGP_SPRETEiJ_P0089189 | MGP_SPRETEiJ_P0033348 | CCR4-NOT transcription complex, subunit 1. | Pumilio RNA-binding family member 2. | 0.708 |
Dazl | Ddx4 | MGP_SPRETEiJ_P0047131 | MGP_SPRETEiJ_P0037172 | Deleted in azoospermia-like. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 4. | 0.857 |
Dazl | Dnd1 | MGP_SPRETEiJ_P0047131 | MGP_SPRETEiJ_P0048344 | Deleted in azoospermia-like. | DND microRNA-mediated repression inhibitor 1. | 0.660 |
Dazl | Nanos3 | MGP_SPRETEiJ_P0047131 | MGP_SPRETEiJ_P0088725 | Deleted in azoospermia-like. | Nanos C2HC-type zinc finger 3. | 0.676 |
Dazl | Prdm14 | MGP_SPRETEiJ_P0047131 | MGP_SPRETEiJ_P0017734 | Deleted in azoospermia-like. | PR domain containing 14. | 0.699 |
Dazl | Pum2 | MGP_SPRETEiJ_P0047131 | MGP_SPRETEiJ_P0033348 | Deleted in azoospermia-like. | Pumilio RNA-binding family member 2. | 0.771 |
Dazl | Stra8 | MGP_SPRETEiJ_P0047131 | MGP_SPRETEiJ_P0076062 | Deleted in azoospermia-like. | Stimulated by retinoic acid gene 8. | 0.722 |
Dazl | Tfap2c | MGP_SPRETEiJ_P0047131 | MGP_SPRETEiJ_P0058629 | Deleted in azoospermia-like. | Transcription factor AP-2, gamma. | 0.516 |
Ddx4 | Cnot1 | MGP_SPRETEiJ_P0037172 | MGP_SPRETEiJ_P0089189 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 4. | CCR4-NOT transcription complex, subunit 1. | 0.510 |
Ddx4 | Dazl | MGP_SPRETEiJ_P0037172 | MGP_SPRETEiJ_P0047131 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 4. | Deleted in azoospermia-like. | 0.857 |
Ddx4 | Dnd1 | MGP_SPRETEiJ_P0037172 | MGP_SPRETEiJ_P0048344 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 4. | DND microRNA-mediated repression inhibitor 1. | 0.544 |
Ddx4 | Nanos3 | MGP_SPRETEiJ_P0037172 | MGP_SPRETEiJ_P0088725 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 4. | Nanos C2HC-type zinc finger 3. | 0.648 |
Ddx4 | Prdm14 | MGP_SPRETEiJ_P0037172 | MGP_SPRETEiJ_P0017734 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 4. | PR domain containing 14. | 0.562 |
Ddx4 | Pum1 | MGP_SPRETEiJ_P0037172 | MGP_SPRETEiJ_P0067269 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 4. | Pumilio RNA-binding family member 1. | 0.414 |
Ddx4 | Pum2 | MGP_SPRETEiJ_P0037172 | MGP_SPRETEiJ_P0033348 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 4. | Pumilio RNA-binding family member 2. | 0.414 |
Ddx4 | Stra8 | MGP_SPRETEiJ_P0037172 | MGP_SPRETEiJ_P0076062 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 4. | Stimulated by retinoic acid gene 8. | 0.709 |
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