STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Heatr3HEAT repeat containing 3. (679 aa)    
Predicted Functional Partners:
Psmd4
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 4.
      
 0.686
Rpl5
Ribosomal protein L5.
    
 
 0.685
Rpf2
Ribosome production factor 2 homolog.
   
 
 0.658
Rrs1
Ribosome biogenesis regulator 1.
   
 
 0.574
Grwd1
Glutamate-rich WD repeat containing 1.
   
  
 0.562
MGP_SPRETEiJ_P0046907
annotation not available
   
 
 0.535
Rpl11
Ribosomal protein L11.
   
 
 0.535
MGP_SPRETEiJ_P0073008
annotation not available
   
 
 0.535
Puf60
poly-U binding splicing factor 60.
      
 0.515
4933402J07Rik
RIKEN cDNA 4933402J07 gene.
      
 0.509
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.