Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Eftud2 | Lsm2 | MGP_SPRETEiJ_P0031755 | MGP_SPRETEiJ_P0046266 | Elongation factor Tu GTP binding domain containing 2. | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated. | 0.991 |
Eftud2 | Lsm6 | MGP_SPRETEiJ_P0031755 | MGP_SPRETEiJ_P0088586 | Elongation factor Tu GTP binding domain containing 2. | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. | 0.987 |
Eftud2 | MGP_SPRETEiJ_P0075587 | MGP_SPRETEiJ_P0031755 | MGP_SPRETEiJ_P0075587 | Elongation factor Tu GTP binding domain containing 2. | annotation not available | 0.995 |
Eftud2 | Prpf31 | MGP_SPRETEiJ_P0031755 | MGP_SPRETEiJ_P0080329 | Elongation factor Tu GTP binding domain containing 2. | pre-mRNA processing factor 31. | 0.997 |
Eftud2 | Prpf6 | MGP_SPRETEiJ_P0031755 | MGP_SPRETEiJ_P0059033 | Elongation factor Tu GTP binding domain containing 2. | pre-mRNA splicing factor 6. | 0.998 |
Eftud2 | Prpf8 | MGP_SPRETEiJ_P0031755 | MGP_SPRETEiJ_P0029649 | Elongation factor Tu GTP binding domain containing 2. | pre-mRNA processing factor 8. | 0.999 |
Eftud2 | Sart1 | MGP_SPRETEiJ_P0031755 | MGP_SPRETEiJ_P0049552 | Elongation factor Tu GTP binding domain containing 2. | Squamous cell carcinoma antigen recognized by T cells 1. | 0.996 |
Eftud2 | Snrnp200 | MGP_SPRETEiJ_P0031755 | MGP_SPRETEiJ_P0056522 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein 200 (U5). | 0.998 |
Eftud2 | Snrpd3 | MGP_SPRETEiJ_P0031755 | MGP_SPRETEiJ_P0024564 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein D3. | 0.996 |
Eftud2 | Txnl4b | MGP_SPRETEiJ_P0031755 | MGP_SPRETEiJ_P0089465 | Elongation factor Tu GTP binding domain containing 2. | Thioredoxin-like 4B. | 0.986 |
Lsm2 | Eftud2 | MGP_SPRETEiJ_P0046266 | MGP_SPRETEiJ_P0031755 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated. | Elongation factor Tu GTP binding domain containing 2. | 0.991 |
Lsm2 | Lsm6 | MGP_SPRETEiJ_P0046266 | MGP_SPRETEiJ_P0088586 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated. | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. | 0.999 |
Lsm2 | MGP_SPRETEiJ_P0075587 | MGP_SPRETEiJ_P0046266 | MGP_SPRETEiJ_P0075587 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated. | annotation not available | 0.999 |
Lsm2 | Prpf31 | MGP_SPRETEiJ_P0046266 | MGP_SPRETEiJ_P0080329 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated. | pre-mRNA processing factor 31. | 0.995 |
Lsm2 | Prpf6 | MGP_SPRETEiJ_P0046266 | MGP_SPRETEiJ_P0059033 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated. | pre-mRNA splicing factor 6. | 0.992 |
Lsm2 | Prpf8 | MGP_SPRETEiJ_P0046266 | MGP_SPRETEiJ_P0029649 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated. | pre-mRNA processing factor 8. | 0.993 |
Lsm2 | Sart1 | MGP_SPRETEiJ_P0046266 | MGP_SPRETEiJ_P0049552 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated. | Squamous cell carcinoma antigen recognized by T cells 1. | 0.994 |
Lsm2 | Snrnp200 | MGP_SPRETEiJ_P0046266 | MGP_SPRETEiJ_P0056522 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated. | Small nuclear ribonucleoprotein 200 (U5). | 0.993 |
Lsm2 | Snrpd3 | MGP_SPRETEiJ_P0046266 | MGP_SPRETEiJ_P0024564 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated. | Small nuclear ribonucleoprotein D3. | 0.995 |
Lsm2 | Txnl4b | MGP_SPRETEiJ_P0046266 | MGP_SPRETEiJ_P0089465 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated. | Thioredoxin-like 4B. | 0.985 |
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