STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atp2c2ATPase, Ca++ transporting, type 2C, member 2. (944 aa)    
Predicted Functional Partners:
Pln
Phospholamban.
    
 0.800
Sln
Sarcolipin.
   
 
 0.674
Atp2b2
ATPase, Ca++ transporting, plasma membrane 2.
  
 
0.631
Atp2b4
ATPase, Ca++ transporting, plasma membrane 4.
  
 
0.629
Atp2b3
ATPase, Ca++ transporting, plasma membrane 3.
  
 
0.629
Atp2b1
ATPase, Ca++ transporting, plasma membrane 1.
  
 
0.628
Cmip
c-Maf inducing protein.
      
 0.616
Atp5a1
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1.
   
 
 0.584
Orai3
ORAI calcium release-activated calcium modulator 3.
    
 
 0.537
D130043K22Rik
RIKEN cDNA D130043K22 gene.
      
 0.529
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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