STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Usp10Ubiquitin specific peptidase 10. (793 aa)    
Predicted Functional Partners:
G3bp2
GTPase activating protein (SH3 domain) binding protein 2.
   
 0.993
Trp53
Transformation related protein 53.
    
 0.910
Usp13
Ubiquitin specific peptidase 13 (isopeptidase T-3).
     
 0.888
Trnau1ap
tRNA selenocysteine 1 associated protein 1.
    
 0.868
Cftr
Cystic fibrosis transmembrane conductance regulator.
    
  0.856
Nelfe
Negative elongation factor complex member E, Rdbp.
    
 0.841
Supt5
Suppressor of Ty 5, DSIF elongation factor subunit.
    
  0.807
Rtf1
RTF1, Paf1/RNA polymerase II complex component.
   
  0.805
Nelfa
Negative elongation factor complex member A, Whsc2.
   
 
  0.804
Eloc
Elongin C.
     
 0.801
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.