STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpl13Ribosomal protein L13. (211 aa)    
Predicted Functional Partners:
Rpl7
Ribosomal protein L7.
   
 0.999
Rpl10a
Ribosomal protein L10A.
   
 0.999
Fau
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).
   
 0.999
MGP_SPRETEiJ_P0049674
annotation not available
   
 0.999
MGP_SPRETEiJ_P0070535
annotation not available
  
 0.999
Rpl5
Ribosomal protein L5.
   
 0.999
MGP_SPRETEiJ_P0075021
annotation not available
   
 0.999
Rpl18
Ribosomal protein L18.
   
 0.999
Rpl27a
Ribosomal protein L27A.
   
 0.999
Rpl18a
Ribosomal protein L18A.
   
 0.999
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.