STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chmp1aCharged multivesicular body protein 1A. (196 aa)    
Predicted Functional Partners:
Vta1
Vesicle (multivesicular body) trafficking 1.
    
 0.995
Chmp3
Charged multivesicular body protein 3.
 
 
 0.994
Vps4a
Vacuolar protein sorting 4A.
   
 0.994
Vps4b
Vacuolar protein sorting 4B.
   
 0.993
Chmp2a
Charged multivesicular body protein 2A.
   
0.993
Chmp2b
Charged multivesicular body protein 2B.
   
 0.986
Chmp5
Charged multivesicular body protein 5.
   
 0.977
MGP_SPRETEiJ_P0038590
annotation not available
    
 0.975
2610002M06Rik
RIKEN cDNA 2610002M06 gene.
  
  
0.971
Chmp4c
Charged multivesicular body protein 4C.
    
 0.969
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.