STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pafah1b2Platelet-activating factor acetylhydrolase, isoform 1b, subunit 2. (229 aa)    
Predicted Functional Partners:
Pafah1b1
Platelet-activating factor acetylhydrolase, isoform 1b, subunit 1.
    
 0.997
Pafah1b3
Platelet-activating factor acetylhydrolase, isoform 1b, subunit 3.
  
 
0.996
Pafah2
Platelet-activating factor acetylhydrolase 2.
     
 0.907
Pla2g7
Phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma).
     
 0.859
Lpcat1
Lysophosphatidylcholine acyltransferase 1.
     
 0.856
Lpcat2
Lysophosphatidylcholine acyltransferase 2.
     
 0.856
Cltc
Clathrin, heavy polypeptide (Hc).
   
  0.852
Lpcat2b
Lysophosphatidylcholine acyltransferase 2B.
     
 0.848
Pla2g12a
Phospholipase A2, group XIIA.
     
 0.780
Pla2g4d
Phospholipase A2, group IVD.
     
 0.775
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.