STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Colca2COLCA2 homolog. (239 aa)    
Predicted Functional Partners:
1810046K07Rik
RIKEN cDNA 1810046K07 gene.
  
   
 0.672
1110032A03Rik
RIKEN cDNA 1110032A03 gene.
      
 0.479
MGP_SPRETEiJ_P0064341
annotation not available
  
     0.474
Wbp1l
WW domain binding protein 1 like.
      
 0.454
Rlf
Rearranged L-myc fusion sequence.
      
 0.453
MGP_SPRETEiJ_P0064342
annotation not available
  
     0.445
Syce3
Synaptonemal complex central element protein 3.
  
     0.436
Higd1a
HIG1 domain family, member 1A.
      
 0.402
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.