STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Larp6La ribonucleoprotein domain family, member 6. (492 aa)    
Predicted Functional Partners:
Strap
Serine/threonine kinase receptor associated protein.
    
 
 0.623
Larp4b
La ribonucleoprotein domain family, member 4B.
      
 0.614
Pex5l
Peroxisomal biogenesis factor 5-like.
      
 0.509
Gmnc
Geminin coiled-coil domain containing.
      
 0.476
MGP_SPRETEiJ_P0039979
annotation not available
      
 0.473
Mab21l3
Mab-21-like 3.
      
 0.473
Lyplal1
Lysophospholipase-like 1.
      
 0.465
Rnf6
Ring finger protein (C3H2C3 type) 6.
      
 0.457
Slc35d3
Solute carrier family 35, member D3.
      
 0.451
Igf2bp2
Insulin-like growth factor 2 mRNA binding protein 2.
      
 0.450
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.