STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdv3Carnitine deficiency-associated gene expressed in ventricle 3. (235 aa)    
Predicted Functional Partners:
Pa2g4
Proliferation-associated 2G4.
   
    0.604
Smc2
Structural maintenance of chromosomes 2.
      
 0.513
Rhobtb2
Rho-related BTB domain containing 2.
      
 0.511
Smc1b
Structural maintenance of chromosomes 1B.
      
 0.508
Rpp40
Ribonuclease P 40 subunit.
      
 0.441
Tmem108
Transmembrane protein 108.
      
 0.431
Dap
Death-associated protein.
      
 0.400
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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