STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ifrd2Interferon-related developmental regulator 2. (441 aa)    
Predicted Functional Partners:
Rps27a
Ribosomal protein S27A.
    
  0.922
Fau
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).
    
  0.919
MGP_SPRETEiJ_P0049674
annotation not available
    
  0.919
Rpl18a
Ribosomal protein L18A.
    
 
 0.837
Rpsa
Ribosomal protein SA.
   
   0.823
MGP_SPRETEiJ_P0065358
annotation not available
    
   0.819
Rps16
Ribosomal protein S16.
    
   0.818
MGP_SPRETEiJ_P0018300
annotation not available
    
   0.817
Rpl37a
Ribosomal protein L37a.
    
   0.817
Rps12
Ribosomal protein S12.
    
   0.817
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.