STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_SPRETEiJ_P0093883annotation not available (265 aa)    
Predicted Functional Partners:
Sema4d
annotation not available
    
 0.999
Rnd1
Rho family GTPase 1.
    
 0.997
Erbb2
Erb-b2 receptor tyrosine kinase 2.
    
 0.990
Arhgef12
Rho guanine nucleotide exchange factor (GEF) 12.
    
 0.989
Met
Met proto-oncogene.
    
0.987
Sema4a
annotation not available
    
 0.983
Rac2
Rac family small GTPase 2.
    
 0.982
Sema4c
annotation not available
    
 0.979
Rac1
Rac family small GTPase 1.
    
 0.979
Sema4f
Sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain.
    
 0.971
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.