STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc25a38Solute carrier family 25, member 38. (326 aa)    
Predicted Functional Partners:
Abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
      
 0.613
Ppox
Protoporphyrinogen oxidase.
      
 0.564
Alas2
Aminolevulinic acid synthase 2, erythroid.
      
 0.555
Fech
Ferrochelatase.
      
 0.520
Abcb6
ATP-binding cassette, sub-family B (MDR/TAP), member 6.
      
 0.519
Cpox
Coproporphyrinogen oxidase.
      
 0.517
Urod
Uroporphyrinogen decarboxylase.
      
 0.517
Abcb10
ATP-binding cassette, sub-family B (MDR/TAP), member 10.
      
 0.517
Glrx5
Glutaredoxin 5.
      
 0.516
Sfxn1
Sideroflexin 1.
      
 0.513
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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