Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Adgrl1 | Nyx | MGP_SPRETEiJ_P0088687 | MGP_SPRETEiJ_P0094794 | Adhesion G protein-coupled receptor L1. | Nyctalopin. | 0.835 |
Adgrl2 | Nyx | MGP_SPRETEiJ_P0063432 | MGP_SPRETEiJ_P0094794 | Adhesion G protein-coupled receptor L2. | Nyctalopin. | 0.835 |
Adgrl3 | Nyx | MGP_SPRETEiJ_P0071472 | MGP_SPRETEiJ_P0094794 | Adhesion G protein-coupled receptor L3. | Nyctalopin. | 0.835 |
Cabp4 | Cacna1f | MGP_SPRETEiJ_P0049401 | MGP_SPRETEiJ_P0094557 | Calcium binding protein 4. | Calcium channel, voltage-dependent, alpha 1F subunit. | 0.832 |
Cabp4 | Grm6 | MGP_SPRETEiJ_P0049401 | MGP_SPRETEiJ_P0027845 | Calcium binding protein 4. | Glutamate receptor, metabotropic 6. | 0.674 |
Cabp4 | Nyx | MGP_SPRETEiJ_P0049401 | MGP_SPRETEiJ_P0094794 | Calcium binding protein 4. | Nyctalopin. | 0.664 |
Cabp4 | Trpm1 | MGP_SPRETEiJ_P0049401 | MGP_SPRETEiJ_P0083271 | Calcium binding protein 4. | Transient receptor potential cation channel, subfamily M, member 1. | 0.518 |
Cacna1f | Cabp4 | MGP_SPRETEiJ_P0094557 | MGP_SPRETEiJ_P0049401 | Calcium channel, voltage-dependent, alpha 1F subunit. | Calcium binding protein 4. | 0.832 |
Cacna1f | Grm6 | MGP_SPRETEiJ_P0094557 | MGP_SPRETEiJ_P0027845 | Calcium channel, voltage-dependent, alpha 1F subunit. | Glutamate receptor, metabotropic 6. | 0.540 |
Cacna1f | Nyx | MGP_SPRETEiJ_P0094557 | MGP_SPRETEiJ_P0094794 | Calcium channel, voltage-dependent, alpha 1F subunit. | Nyctalopin. | 0.632 |
Cacna1f | Trpm1 | MGP_SPRETEiJ_P0094557 | MGP_SPRETEiJ_P0083271 | Calcium channel, voltage-dependent, alpha 1F subunit. | Transient receptor potential cation channel, subfamily M, member 1. | 0.521 |
Grm6 | Cabp4 | MGP_SPRETEiJ_P0027845 | MGP_SPRETEiJ_P0049401 | Glutamate receptor, metabotropic 6. | Calcium binding protein 4. | 0.674 |
Grm6 | Cacna1f | MGP_SPRETEiJ_P0027845 | MGP_SPRETEiJ_P0094557 | Glutamate receptor, metabotropic 6. | Calcium channel, voltage-dependent, alpha 1F subunit. | 0.540 |
Grm6 | Nyx | MGP_SPRETEiJ_P0027845 | MGP_SPRETEiJ_P0094794 | Glutamate receptor, metabotropic 6. | Nyctalopin. | 0.783 |
Grm6 | Trpm1 | MGP_SPRETEiJ_P0027845 | MGP_SPRETEiJ_P0083271 | Glutamate receptor, metabotropic 6. | Transient receptor potential cation channel, subfamily M, member 1. | 0.616 |
Nyx | Adgrl1 | MGP_SPRETEiJ_P0094794 | MGP_SPRETEiJ_P0088687 | Nyctalopin. | Adhesion G protein-coupled receptor L1. | 0.835 |
Nyx | Adgrl2 | MGP_SPRETEiJ_P0094794 | MGP_SPRETEiJ_P0063432 | Nyctalopin. | Adhesion G protein-coupled receptor L2. | 0.835 |
Nyx | Adgrl3 | MGP_SPRETEiJ_P0094794 | MGP_SPRETEiJ_P0071472 | Nyctalopin. | Adhesion G protein-coupled receptor L3. | 0.835 |
Nyx | Cabp4 | MGP_SPRETEiJ_P0094794 | MGP_SPRETEiJ_P0049401 | Nyctalopin. | Calcium binding protein 4. | 0.664 |
Nyx | Cacna1f | MGP_SPRETEiJ_P0094794 | MGP_SPRETEiJ_P0094557 | Nyctalopin. | Calcium channel, voltage-dependent, alpha 1F subunit. | 0.632 |
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