Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Esx1 | Ldb1 | MGP_SPRETEiJ_P0096554 | MGP_SPRETEiJ_P0050992 | Extraembryonic, spermatogenesis, homeobox 1. | LIM domain binding 1. | 0.416 |
Esx1 | Ldb2 | MGP_SPRETEiJ_P0096554 | MGP_SPRETEiJ_P0070689 | Extraembryonic, spermatogenesis, homeobox 1. | LIM domain binding 2. | 0.416 |
Esx1 | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0096554 | MGP_SPRETEiJ_P0094991 | Extraembryonic, spermatogenesis, homeobox 1. | annotation not available | 0.455 |
Esx1 | Srf | MGP_SPRETEiJ_P0096554 | MGP_SPRETEiJ_P0046921 | Extraembryonic, spermatogenesis, homeobox 1. | Serum response factor. | 0.667 |
Ldb1 | Esx1 | MGP_SPRETEiJ_P0050992 | MGP_SPRETEiJ_P0096554 | LIM domain binding 1. | Extraembryonic, spermatogenesis, homeobox 1. | 0.416 |
Ldb1 | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0050992 | MGP_SPRETEiJ_P0094991 | LIM domain binding 1. | annotation not available | 0.416 |
Ldb2 | Esx1 | MGP_SPRETEiJ_P0070689 | MGP_SPRETEiJ_P0096554 | LIM domain binding 2. | Extraembryonic, spermatogenesis, homeobox 1. | 0.416 |
Ldb2 | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0070689 | MGP_SPRETEiJ_P0094991 | LIM domain binding 2. | annotation not available | 0.416 |
MGP_SPRETEiJ_P0094991 | Esx1 | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0096554 | annotation not available | Extraembryonic, spermatogenesis, homeobox 1. | 0.455 |
MGP_SPRETEiJ_P0094991 | Ldb1 | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0050992 | annotation not available | LIM domain binding 1. | 0.416 |
MGP_SPRETEiJ_P0094991 | Ldb2 | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0070689 | annotation not available | LIM domain binding 2. | 0.416 |
MGP_SPRETEiJ_P0094991 | Srf | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0046921 | annotation not available | Serum response factor. | 0.402 |
MGP_SPRETEiJ_P0094991 | Tlx1 | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0050951 | annotation not available | T cell leukemia, homeobox 1. | 0.463 |
MGP_SPRETEiJ_P0094991 | Tlx2 | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0077398 | annotation not available | T cell leukemia, homeobox 2. | 0.463 |
MGP_SPRETEiJ_P0094991 | Tlx3 | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0027466 | annotation not available | T cell leukemia, homeobox 3. | 0.463 |
Srf | Esx1 | MGP_SPRETEiJ_P0046921 | MGP_SPRETEiJ_P0096554 | Serum response factor. | Extraembryonic, spermatogenesis, homeobox 1. | 0.667 |
Srf | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0046921 | MGP_SPRETEiJ_P0094991 | Serum response factor. | annotation not available | 0.402 |
Tlx1 | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0050951 | MGP_SPRETEiJ_P0094991 | T cell leukemia, homeobox 1. | annotation not available | 0.463 |
Tlx2 | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0077398 | MGP_SPRETEiJ_P0094991 | T cell leukemia, homeobox 2. | annotation not available | 0.463 |
Tlx3 | MGP_SPRETEiJ_P0094991 | MGP_SPRETEiJ_P0027466 | MGP_SPRETEiJ_P0094991 | T cell leukemia, homeobox 3. | annotation not available | 0.463 |